| Protein ZmHB111 | |
|---|---|
|
ZmHB111 is a protein in the Homeobox family.
|
|
| Information | |
| TF Name: | ZmHB111 |
| Species: | Maize |
| TF Family: | Homeobox |
| Gene Name(Synonym): | KNOX10 |
| Uniprot ID: | A0A1D6PDQ1 |
Protein ZmHB111
ZmHB111 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | |||||
|---|---|---|---|---|---|
| PF00046 | PF03789 | PF03790 | PF03791 | PF05920 | |
| Zm00001eb217480_T001 |  | |  | | |
| Zm00001eb217470_T001 | | | | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d013559 | DAPseq |  |
sequence | fimo | position |
| Zm00001d013559 | DAPseq |  |
sequence | fimo | position |
| Zm00001d013559 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d013559 | PChIPseq |  |
sequence | fimo | position |
| Zm00001d013560 | DAPseq |  |
sequence | fimo | position |
| Zm00001d013560 | DAPseq |  |
sequence | fimo | position |
| Zm00001d013560 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d013560 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHB111 is the regulator
Interactions where ZmHB111 is the target
Expand
Zm00001eb217480_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
MSFVTCVDSQLELTISSKFYAIKYKERIWIAIHYHPTHNTANLGADDNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGE
DNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQR
KRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF03789 |
|
| PF03789 |
|
| PF05920 |
|
| PF00046 |
|
| Hover here to show all domains | |
Nucleotide Sequence
Copy to clipboard
Expand
TACGTGCGCGATGTCTTTTGTAACA...
TACGTGCGCGATGTCTTTTGTAACATGCGTGGACTCACAATTAGAGTTGACAATAAGCTCTAAATTTTACGCTATAAAATATAAAGAGCGCATTTGGATCGCAATCCATTACCACCCCACTCACAATACTGCTAACCTTGGAGCAGATGACAACGGCTACGAAGGATGTGGCTCCTCCGACGAAGATGAGCAAGAAGCCGTCGACTTGGGCGGCCTGTCAGTTCTTGAGACCGGCAGCCCGTCCGGGGAGGACAACGAATTGAAGAACCGCCTCCTGAACAAGTACAGCGGCTACCTGAGCAACCTCTGGAGGGAGCTCTCGAGGAAGAAGAAGAAAGGCAAGCTGCCGAGAGACGCGCGCCAGAAGCTCCTCCACTGGTGGCAGCTGCACTACAGATGGCCCTATCCCTCGGAGCTGGAGAAGGCGGCGCTGGCGGAGTCGACGGGGCTCGAAGCGAAGCAGATCAACAATTGGTTCATCAACCAGCGGAAGCGCCACTGGAAGCAGGCACCGCCGACTATGGCGCTGGCCACAGCAAATTACATGCTGGGTCCGCACGACGGCGGCGGTTCTAGCAGCTCGGCCTCCGCCGCCGGTCTCCGCGTGGAGGAGCAATACTTCACCGGCGGAAGCTCGTATCCCCGTGGCCCGTGACGACGATGTCACGAGGTGTCGACATGGATTGTTGTCGTGCATACATATACATACATACATGATCATTAAATTTGGGTATATAGATGGTTCATGGTGTGGACGTGTGGTGTTTCCTATATACAGAAATTTGATTGTCTCCTTACTTGCATTGCTCATATACATACATGTCTATATATGCAGCTAATGCCACAATTATGGAATTGTAACATTACTATTATTTGTTTCACTAACACGAGAGCAGTTGTACACATATATAAGCATGCACACATGGATGTTCCTTCTGATGTATGGTCCATGTCTGGCTAGCTGTTGTTGGAACTTAACTGGAAC
GRMZM2G002225_T01 from maize genome v3
Amino Acid Sequence
Copy to clipboard
MEVEEELPASADLTGGSKQATTTTPFYLALDHTASATSSPPPAAPLPCAANSERGSEIIKAKIMSHPLYPAVLRAFIDCR
KVGAPPEIVGRLSALADDVEMNSDDKQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQEADEFFRSMEAQIDAFSLLD
DNGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGEDNELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQL
HYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHWKQAPPTMALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTG
GSSYPRGP
Nucleotide Sequence
Copy to clipboard
Expand
TCCATTCCTCAAACAATAAAATATC...
TCCATTCCTCAAACAATAAAATATCCTCAGATAGCTAGGCTCGGTCGGGACGTACGCATGGAGGTGGAGGAGGAGCTGCCTGCTAGCGCTGATCTTACCGGTGGCTCAAAGCAGGCGACCACCACGACGCCCTTCTACCTCGCCTTAGATCACACAGCATCTGCCACGTCGTCTCCACCGCCGGCGGCGCCGCTGCCGTGTGCTGCCAACAGCGAGAGGGGATCCGAAATAATCAAGGCGAAGATCATGTCCCACCCACTCTATCCGGCTGTCTTGAGAGCCTTCATAGACTGCCGGAAGGTCGGAGCGCCGCCAGAGATTGTCGGCCGGCTTTCTGCCCTCGCTGATGACGTCGAAATGAATTCAGACGACAAACAAGAACAGCGACGAGCGGCAGACCCAGAGCTCGACCAGTTCATGGAGATCTACTGTCACATGTTGGTGAGGTACAGACAGGAGCTCACAAGGCCAATCCAGGAAGCCGACGAATTCTTCAGGAGCATGGAGGCCCAGATCGACGCGTTCTCGTTATTAGATGACAACGGCTACGAAGGATGTGGCTCCTCCGACGAAGATGAGCAAGAAGCCGTCGACTTGGGCGGCCTGTCAGTTCTTGAGACCGGCAGCCCGTCCGGGGAGGACAACGAATTGAAGAACCGCCTCCTGAACAAGTACAGCGGCTACCTGAGCAACCTCTGGAGGGAGCTCTCGAGGAAGAAGAAGAAAGGCAAGCTGCCGAGAGACGCGCGCCAGAAGCTCCTCCACTGGTGGCAGCTGCACTACAGATGGCCCTATCCCTCGGAGCTGGAGAAGGCGGCGCTGGCGGAGTCGACGGGGCTCGAAGCGAAGCAGATCAACAATTGGTTCATCAACCAGCGGAAGCGCCACTGGAAGCAGGCACCGCCGACTATGGCGCTGGCCACAGCAAATTACATGCTGGGTCCGCACGACGGCGGCGGTTCTAGCAGCTCGGCCTCCGCCGCCGGTCTCCGCGTGGAGGAGCAATACTTCACCGGCGGAAGCTCGTATCCCCGTGGCCCGTGA
Zm00001d013559_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MEVEEELPASADLTGGSKQATTTTPFYLALDHTASATSSPPPAAPLPCAANSERGSEIIKAKIMSHPLYPAVLRAFIDCR
KVGAPPEIVGRLSALADDVEMNSDDKQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQEADEFFRSMEAQIDAFSLLG
DYV
Nucleotide Sequence
Copy to clipboard
Expand
ATATCCTCTCTCTCTCGCTCCCCAG...
ATATCCTCTCTCTCTCGCTCCCCAGAACCAGAATCGAATAGAAGGACGGCCTTACCTTGCCCTAATGCCTCCTCGTCCGATCCATTCCTCAAACAATAAAATATCCTCAGATAGCTAGGCTCGGTCGGGACGTACGCATGGAGGTGGAGGAGGAGCTGCCTGCTAGCGCTGATCTTACCGGTGGCTCAAAGCAGGCGACCACCACGACGCCCTTCTACCTCGCCTTAGATCACACAGCATCTGCCACGTCGTCTCCACCGCCGGCGGCGCCGCTGCCGTGTGCTGCCAACAGCGAGAGGGGATCCGAAATAATCAAGGCGAAGATCATGTCCCACCCACTCTATCCGGCTGTCTTGAGAGCCTTCATAGACTGCCGGAAGGTCGGAGCGCCGCCAGAGATTGTCGGCCGGCTTTCTGCCCTCGCTGATGACGTCGAAATGAATTCAGACGACAAACAAGAACAGCGACGAGCGGCAGACCCAGAGCTCGACCAGTTCATGGAGATCTACTGTCACATGTTGGTGAGGTACAGACAGGAGCTCACAAGGCCAATCCAGGAAGCCGACGAATTCTTCAGGAGCATGGAGGCCCAGATCGACGCGTTCTCGTTATTAGGTGATTATGTTTAACTAAACTGAGTTGATAATCGTCTTGAGTTGTTTTTTTTCCGTCTCTGCTGGGAGTAGCCGTAGCCGTAGTACTATACCGACTGTTGCAGTACGTGCAGGTATC
Zm00001d013560_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MALATANYMLGPHDGGGSSSSASAAGLRVEEQYFTGGSSYPRGP
Nucleotide Sequence
Copy to clipboard
Expand
GATGACAACGGCTACGAAGGATGTG...
GATGACAACGGCTACGAAGGATGTGGCTCCTCCGACGAAGATGAGCAAGAAGCCGTCGACTTGGGCGGCCTGTCAGTTCTTGAGACCGGCAGCCCGTCCGGGGAGGACAACGAATTGAAGAACCGCCTCCTGAACAAGTACAGCGGCTACCTGAGCAACCTCTGGAGGGAGCTCTCGAGGAAGAAGAAGAAAGGCAAGCTGCCGAGAGACGCGCGCCAGAAGCTCCTCCACTGGTGGCAGCTGCACTACAGATGGCCCTATCCCTCGGAGCTGGAGAAGGCGGCGCTGGCGGAGTCGACGGGGCTCGAAGCGAAGCAGATCAACAATTGGTTCATCAACCAGCGGAAGCGCCACTGGAAGCAGGCACCGCCGACTATGGCGCTGGCCACAGCAAATTACATGCTGGGTCCGCACGACGGCGGCGGTTCTAGCAGCTCGGCCTCCGCCGCCGGTCTCCGCGTGGAGGAGCAATACTTCACCGGCGGAAGCTCGTATCCCCGTGGCCCGTGACGACGATGTCACGAGGTGTCGACATGGATTGTTGTCGTGCATACATATACATACATACATGATCATTAAATTTGGGTATATAGATGGTTCATGGTGTGGACGTGTGGTGTTTCCTATATACAGAAATTTGATTGTCTCCTTACTTGCATTGCTCATATACATACATGTCTATATATGCAGCTAATGCCACAATTATGGAATTGTAACATTACTATTATTTGTTTCACTAACACGAGAGCAGTTGT
Zm00001eb217470_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MEVEEELPASADLTGGSKQATTTTPFYLALDHTASATSSPPPAAPLPCAANSERGSEIIKAKIMSHPLYPAVLRAFIDCR
KVGAPPEIVGRLSALADDVEMNSDDKQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQEADEFFRSMEAQIDAFSLLG
DYV
Nucleotide Sequence
Copy to clipboard
Expand
GCTATTTCTTTTCTTCAGCAACAAT...
GCTATTTCTTTTCTTCAGCAACAATTCGAGCATCCCCTCCCGTTCCATTATTGACCCCTTTAATTTCCGTCCCATGAGAGATGACTACCCAGCTACTGTATATCCTCTCTCTCTCGCTCCCCAGAACCAGAATCGAATAGAAGGACGGCCTTACCTTGCCCTAATGCCTCCTCGTCCGATCCATTCCTCAAACAATAAAATATCCTCAGATAGCTAGGCTCGGTCGGGACGTACGCATGGAGGTGGAGGAGGAGCTGCCTGCTAGCGCTGATCTTACCGGTGGCTCAAAGCAGGCGACCACCACGACGCCCTTCTACCTCGCCTTAGATCACACAGCATCTGCCACGTCGTCTCCACCGCCGGCGGCGCCGCTGCCGTGTGCTGCCAACAGCGAGAGGGGATCCGAAATAATCAAGGCGAAGATCATGTCCCACCCACTCTATCCGGCTGTCTTGAGAGCCTTCATAGACTGCCGGAAGGTCGGAGCGCCGCCAGAGATTGTCGGCCGGCTTTCTGCCCTCGCTGATGACGTCGAAATGAATTCAGACGACAAACAAGAACAGCGACGAGCGGCAGACCCAGAGCTCGACCAGTTCATGGAGATCTACTGTCACATGTTGGTGAGGTACAGACAGGAGCTCACAAGGCCAATCCAGGAAGCCGACGAATTCTTCAGGAGCATGGAGGCCCAGATCGACGCGTTCTCGTTATTAGGTGATTATGTTTAACTAAACTGAGTTGATAATCGTCTTGAGTTGTTTTTTTTCCGTCTCTGCTGGGAGTAGCCGTAGCCGTAGTACTATACCGACTGTTGCAGTACGTGCAGGTATCCTAGTACACATGATTGTTTGCCAATCACAGAAAACATTTATTTGGCGCTGTGTAGTATTAAGTCCTTGCGTGCAT
Copyright © 2023 Grassius.org | Last updated: 2023-06-26